rs230768271 SNP Detail

Summary

• ID
  rs230768271
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:160761104 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGttttttt tttttttttt tttttttggt
  ttttcgagac aggacttttc tgtgtagcct tggctgtcct ggaactcact ctgtagacca
  ggttggcctc gaactcagaa atccgcctgc ctctgcctcc caagtgctgg gattaaaggc
  R
  tgcgccacca ccacccggcA AAGAtttttt ttcttaaaac aggatcttat gtatcctaag
  ccggtctcaa actcactgtg taactggcct tgaactcctg atcctcttgg ttatgggttt
  gtgccaccat gcctggctta tgtggtgcta                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320079950	CHEV_1_162863665	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230768271					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:160761104 () rs orientation: forward

Symbol	Name	Function Class
Rc3h1	RING CCCH (C3H) domains 1	Intron
Rr421728	regulatory region 421728	471 bp proximal
Rr421729	regulatory region 421729	484 bp proximal
Rr421730	regulatory region 421730	781 bp proximal
Rr421731	regulatory region 421731	1018 bp proximal