rs230741506 SNP Detail

Summary

• ID
  rs230741506
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:151865822 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTATTCCG GCCAGAGAGA
  TTAAAGGTGT GCGCTAAGGG CTGAGCCACA TTATAACTAG AAGCTGGTTT GGTTGTTTTT
  GTTTTCAGTA AACAACACAA TCTCTGGGTG CAACACTACT CTTCGTTGCT GTGGCATCTC
  TCCATATCAG GAGTTTGAAC AGCTCTAGAT GCTGTCCTAG TCTTACAGAA TCTTATTCTG
  R
  ACATCTCCTG AAGTCACGCA GCAAGTCAGG AACCCATCTT TCTCCTCACC CCTCTCTGAA
  GCCTGGGAAG TAGACTCAGG AATGCTCACA GTACCCTGGA ATCACTCACT ACGCTGTGTC
  CCGGGCCCAG AGGAAGAAGG CTGCCAAGCA CGAAGCTTTT CAACACCTGA TAGTACTGGC
  TCACTCGTGT TTCTAATGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320561838	CHEV_2_151849638	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230741506					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:151865822 () rs orientation: forward

Symbol	Name	Function Class
Gm75398	predicted gene, 75398	within coordinates
Gm75402	predicted gene, 75402	within coordinates
Rr374074	regulatory region 374074	within coordinates
Rr567261	regulatory region 567261	1685 bp distal
Rr567262	regulatory region 567262	1489 bp distal
Rr567263	regulatory region 567263	502 bp proximal
Rr567264	regulatory region 567264	699 bp proximal