rs230643918 SNP Detail

Summary

• ID
  rs230643918
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:104964516 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTCA GGACCTCTGG AAGAGCAGTT
  G
  GTGCTCTTAA CCACTGGGCC ATCTC                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321242973	CHEV_4_104779924	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230643918					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:104964516 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14519	CpG island 14519	1768 bp proximal
Prkaa2	protein kinase, AMP-activated, alpha 2 catalytic subunit	Intron
Rr596533	regulatory region 596533	1114 bp proximal
Rr596534	regulatory region 596534	1498 bp proximal