rs230582517 SNP Detail

Summary

• ID
  rs230582517
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:5439481 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTAAGAAC TACTTAAAAC
  ACTCCACGTT CATTGTTTGC TTTATTTTTA TAAACAAATA GTCATTATTT TTTGTTCAGC
  AAACATTTGC TATTGTAAAG CTTCACACCT CCACATTTAG CAACATGTTC CCATATGCGG
  TTGTGACTCA CTGCTTAAGA AGCTGGGGCT TGCAGTGGTC TGAAGGAGAA AAGTCCCCCA
  R
  TAGACTCATG TGTTTGATTA CTTGGTCCTT TGCCTGGTGG TCATGTTTGG GGAGGTTTTG
  GGACCTTTAG AAGTGGAAGT CTTGCTGAGG ATGTACAATA CTGGAGGTAG GTTTTAAGGG
  CTTATAGCCT TACCTCACTT CCTGTTCTCT CTCGCTCACT TGCTCCCCCT CTCCCTCCCT
  TCCTCCTTTC CTCCTTTCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321729115	CHEV_6_5389481	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230582517					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:5439481 () rs orientation: forward

Symbol	Name	Function Class
Rr626148	regulatory region 626148	1401 bp distal