rs230422090 SNP Detail

Summary

• ID
  rs230422090
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:117863616 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTATGTGT GCATGTATGT
  GGTATATGTA TATGTATGTG TTTGTGTGTG TGTGTGTGTA TATGCAAGAA CATGGTATAT
  GTGTATGCCC ATGTGTGAGT GTGTGTACCT CTGTGTATAT GTACATTTGT GTATTCAGTG
  TGTTCACGTG TATACATGTA TCTTCATGTT TGTGTCTGTA TATATGTGTG TGTCCATGTG
  Y
  GTGTGTTGTG TTTGTGTGTA TGTTTCTTCA TGTGTGTGTC TGTTTCTCTG TGTGTGTCTG
  TACACATACA CATGTTCATA AATATGTATG TATGTATGTA TGTATGTATG TGTGTATGTA
  TATATGTGTG TGTAAGTGTG TGTATAACTG TGTATGTGTG CTGTGTGTGT ATGTTTCCGA
  GAGCAAGGAA AGTTCAGTCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320900847	CHEV_3_117772885	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230422090					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:117863616 () rs orientation: forward

Symbol	Name	Function Class
Gm65635	predicted gene, 65635	within coordinates
Rr583881	regulatory region 583881	191 bp proximal
Rr583882	regulatory region 583882	465 bp proximal