rs230395044 SNP Detail

Summary

• ID
  rs230395044
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95948883 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCGAGACAG TTCCCCGACC ACTGTCACGT
  GCTTTGAGAC AGTCCCAGAC ATCTTTTTGA ACTGTGGATA ATTTTCAACA AAGGCCTGCC
  ATGGAAGAAA CATTAATGGA AGATGTTGTT ACATTCTGAC TAAGACTAGC CATTCGTAAA
  W
  AAGACTGTAa gctgggcatg atggcacatg cttttgatcc cagcactcac aggcagagag
  gcaggtggat ctctgagttc aaggccagcc tagtctacaa agcaagttcc aggacagcct
  gggctatgca aataaactcg gtctcaaaaa                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320841388	CHEV_3_95845494	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230395044					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95948883 () rs orientation: forward

Symbol	Name	Function Class
D3Umi26	DNA segment, Chr 3, University of Michigan 26	1313 bp proximal
Rr581123	regulatory region 581123	520 bp distal
Rr581124	regulatory region 581124	1621 bp proximal
Vps45	vacuolar protein sorting 45	Intron