rs230382897 SNP Detail

Summary

• ID
  rs230382897
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:165343923 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCTGGAAT CATTCACAGA
  GCCTGGCTTT GAGATGACCC AGATGCTAGG ACTATATATC GAGGCATATA GATAGATAGA
  TAGATAGATA GATAGATAGA TAGATAGATA GATAGATAGA TAGATATAGT GTTATATAGT
  GTTACATATA TTGTCAGTGT GGGCTTCCTC ACAGCAGGGC TGGCAGCTGG ACTTTGTCAT
  Y
  GTCAGCTGTA TGAGACAGGG TCTCCCTGAG TAGTCTAAGC TGCCCTCAAT CCTCCTACTT
  CAGCTTCTCA GTTGCCAGCT TTATGGATGT GTGCCACCAA TCCCAGTTCA GTCAGACTCA
  CCTTGAGGGT CAGGGTCCCA GCGTCCTAGG GTCTCAGCCC AGCTGTCACA TGGCTTGCTA
  CTCCCTGCAA TCTCTTGGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320608181	CHEV_2_165327503	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230382897					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165343923 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12710	CpG island 12710	1589 bp proximal
Rr569936	regulatory region 569936	1294 bp proximal
Rr569937	regulatory region 569937	1795 bp proximal
Slc2a10	solute carrier family 2 (facilitated glucose transporter), member 10	1894 bp upstream
Tssr21725	transcription start site region 21725	1891 bp upstream