rs230251842 SNP Detail

Summary

• ID
  rs230251842
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:63401722 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATTTCAAGA TATATTAACT
  AAAGAGACCT CTAACTTCCA CCAGCCTCCG AGCTAAGAGA TCATTAGATC ACGCATGGCA
  TTTGTAGCTA AGATTTCTCC AAGTTGATAT TATCTCCCCT CTCGATGGTA TTGATGCAAC
  CACCAATGTA TTTTAAAAAG GGTTTTACTT ATGATTCACT TTGTTCTATT ACTGTTAAAC
  Y
  GTTATAACAC TAATTCCATG TTAGACCATG GAATTTGGAG TAACTTAAAT CCATGTTCAC
  AGGCTATAGT TACTCAGAAT CAGCTTAAAA GTCAAAAAAC TCACATTCCC TTTGAGGTAA
  GAACTGTGTA TTCCAAGGAG TCTTTTATTT TTATTTGGGG GGTGTGTGTG TGATACTTTT
  TTGTTGATAT TTACACTGTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320790004	CHEV_3_63298223	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230251842					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:63401722 () rs orientation: forward

Symbol	Name	Function Class
Rr577573	regulatory region 577573	366 bp distal
Rr577574	regulatory region 577574	324 bp proximal