rs230246126 SNP Detail

Summary

• ID
  rs230246126
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:134876605 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTGG GGGAGAGGAA AAGGACTGTG
  R
  TGTCCATGGT GATGGTCACT TTCTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321351019	CHEV_4_134705209	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230246126					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134876605 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15061	CpG island 15061	1129 bp proximal
Cpgi15062	CpG island 15062	1984 bp proximal
Rr601931	regulatory region 601931	1797 bp distal
Rr601932	regulatory region 601932	84 bp proximal
Rr601933	regulatory region 601933	1322 bp proximal
Runx3	runt related transcription factor 3	Intron