rs230235566 SNP Detail

Summary

• ID
  rs230235566
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:111535564 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGTGATAC AGTGCTAAAC
  TAGCGTCTAA CATGTGATAT GCTTGGTACA TATTTTTGTT GGATGGCTAC ACAAGAAATA
  AACTTTTATA TAAAATGCAG AATTTGGACT CCTCTTCTAA AAATGGGGAA ATCTGCCTGT
  TGTGATAACA ATCTAAGCCT CCTAAGGCTT ACATTTTACA TAGTCCACTT TTGTGTTCTC
  W
  AGTACTTGTG GGATTAATTA TCATGTTAAA TCACTGAAAA GCCCTACACA AACCTGTGTG
  TACATATGGG AAATTTCTGT ATGTCTAAAA GTGAAATCTG AGTCACTGGC ACACACAGTC
  AGCTTGTTCC ATCATTTCCC ATGTGTTAGA TTTCTAAGGC AACTGAAAGA GAAGGAAGGC
  AGAAAAGAGA TCAGTCTGGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321905986	CHEV_6_111508597	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230235566					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:111535564 () rs orientation: forward

Symbol	Name	Function Class
Grm7	glutamate receptor, metabotropic 7	Intron
Rr379936	regulatory region 379936	793 bp upstream
Rr636272	regulatory region 636272	1053 bp proximal