rs230155837 SNP Detail

Summary

• ID
  rs230155837
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:160470131 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGACATCCC CACCTCAGAG
  ATGGGGCTCT GACTCCAGAG ACATGTGTTT GTGTATGCAA AGTGCTATGG TTAGGCATAT
  CATGCACTGG GAGGAAGATG GCCCATAGCA TATCACAGTA TCAGAGGATC TGACTATACA
  CACACATGTA TAAACACATC TTAAAATTAC TTAACCAAAA AAAAAAAAAA AAAAAAGGAG
  T
  GGGGGCGGGG GGGGGGAGGA GCAGATGAGA CAAGAGGCCC ACACTCATGC ATGGATGGAA
  ATAGCTAAGT CCGAGAACCC AGGACAAAGA AAACAGAAGG CTTAGAGAAA GAAGCAAGCA
  TAGAGGGGAG CTTATAGGGG AATGAGATAG GAGTTAGCTC AGCTGTCGTG GAGCTCAGAG
  AAGGTTCACG GTGCGGTTGG                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	C57BL/6J	CZECHII/EiJ	JF1/MsJ	MA/MyJ	NON/ShiLtJ	PWK/PhJ	QSi3/Ianm	RIIIS/J	SJL/J	SWR/J
ss356338931	MGP_WTSI_2_160453947	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	C57BL/6J	CZECHII/EiJ	JF1/MsJ	MA/MyJ	NON/ShiLtJ	PWK/PhJ	QSi3/Ianm	RIIIS/J	SJL/J	SWR/J
rs230155837					SNP	T	T	T	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss356338931	MGP_WTSI_2_160453947	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:160470131 () rs orientation: forward

Symbol	Name	Function Class
Rr569035	regulatory region 569035	110 bp distal
Rr569036	regulatory region 569036	596 bp distal
Rr569037	regulatory region 569037	524 bp distal
Rr569038	regulatory region 569038	1061 bp proximal