rs230155261 SNP Detail

Summary

• ID
  rs230155261
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132484833 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATCTTCGAG GTACGCTTTA AAGTTTTCTA
  GTCGAATTGA AGGCATTTCG GTTCAGTCAG CCTCCAGAAA ATGCAGGAAG CACCATCGAC
  TTACTGTCTT CTCCTTGCAG AGCTGCAACA CGGATGGATG AATGAATTAG CTACCTGTGG
  M
  AACCAAAGAG CCTTAAAAGC TAGCCTtaaa accagatgtg caagccctct ctcaaggata
  gccctggcac tcttgaggca ggaggattag gagttcaagg ccatcctagg ctactttgat
  gactttgggg ccagtctggg ctacctgaaa                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321336229	CHEV_4_132313437	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230155261					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132484833 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14971	CpG island 14971	191 bp distal
Gm70165	predicted gene, 70165	680 bp upstream
Rr601063	regulatory region 601063	281 bp distal
Rr601064	regulatory region 601064	7 bp distal
Smpdl3b	sphingomyelin phosphodiesterase, acid-like 3B	275 bp upstream
Tssr43702	transcription start site region 43702	415 bp upstream
Tssr43703	transcription start site region 43703	370 bp upstream
Tssr43704	transcription start site region 43704	335 bp upstream
Tssr43705	transcription start site region 43705	282 bp upstream
Tssr43706	transcription start site region 43706	263 bp upstream