rs229981375 SNP Detail

Summary

• ID
  rs229981375
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101568854 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCTCAGAGC CACAACAAGG GCCAAGGCAA
  GAGATAACTT AACTCTTGTG ACCCATTAAT CCCAAACCAG GGCTCCAGGA AAATAACTCT
  TAGGCTTTTC ACCATGAATT TGTAACCTCT GCAGTAGGTA CCTAGGAGAC CTGGATTCTC
  R
  CTCAGTGAAC AGGCCTGGTG GGCTTTTCGA ATCCCATTAT ATTCCTGCAG AGAACAAGGC
  ACTTGGTGCT ATGTGAAAAT TGGTTTGCAG TGTGTGTGTA CAGATAGATC ATCAGGAAAA
  CCACAAGTAT TGGCCATTTT GAGTTCTGTA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321231117	CHEV_4_101384262	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229981375					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101568854 () rs orientation: forward

Symbol	Name	Function Class
Rr376927	regulatory region 376927	1888 bp downstream
Rr596204	regulatory region 596204	980 bp distal