rs229949710 SNP Detail

Summary

• ID
  rs229949710
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:71007235 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATTACACC TGTTCTCAGC
  CTCTCCTCTG GTTCTTTGAA CATACCCAGC CTTTCTGCAA ACTATTCCTT TTTGTTTGTT
  TGGTTTGTTT GTTTGTTTGT TTCTGTGTTT GAGATAATCT GCTATATAGC ATAAGATGGC
  CTGGAACTCA CTGTGTAGAC TAATCTCGCC TCAAATTTGG TGAGATTCTC TTGCCTCTGC
  Y
  TCAGTTGGGT GTCTCCTTCT TTGTTTCGGT GAGAAAGTCT TATCTAGCCA TGGCTGGCCT
  TAAGTTCATG GTCCCCTGGC TTCTATCTCC CAAGTGTTGC AATTATAGCC TGCACAGCCC
  CATACATAGC CCAGCCCGAG TCTCAGTTTC TGTCTGAAAA AAAGAAGATT ATATAACAAT
  TATCTTTTGA GAGTGGTTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321816640	CHEV_6_70980245	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229949710					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:71007235 () rs orientation: forward

Symbol	Name	Function Class
Rr631870	regulatory region 631870	380 bp proximal
Rr631871	regulatory region 631871	473 bp proximal