rs229730025 SNP Detail

Summary

• ID
  rs229730025
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132614319 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAAATTTT GATTTGCATA
  AAAATGTACC AGACCACCCC AACCCTTGCT TCCTATTCTG CTCTATTTTC AGAACCCAGG
  CTCAAATATA GGAAAATTAA GTAGCCTTGA CATTCAGGTC TGTAGCCAAT CAGTGATTTT
  AAGGGTTTCA AAGTACTTTT ATTTCTCCCT CCACTCCTAA CTAAGCAATA AAGTAATATC
  R
  TATTTGGGGG GCACATACTG TGTGTGAATC CTTAGGTCAC TGATTCATAA ACACTTCACA
  GTAAGGAAGC ATCCCCATTT TTATCTTTAA ACATTTTTGG TCTGGTTTAC TTTTTTATTT
  GTTTTTCCAA ACAGGGTTTC TCTGTGTAAC CCTGGCTGTC CTGGAACTTA CTCTGTAGAC
  CAAGCTGGCC TCGAACTCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321337142	CHEV_4_132442923	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229730025					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132614319 () rs orientation: forward

Symbol	Name	Function Class
Gm13033	predicted gene 13033	592 bp downstream
Gm70413	predicted gene, 70413	792 bp downstream
Rr601103	regulatory region 601103	1695 bp distal
Rr601104	regulatory region 601104	652 bp proximal
Rr601105	regulatory region 601105	836 bp proximal
Rr601106	regulatory region 601106	946 bp proximal