rs229672073 SNP Detail

Summary

• ID
  rs229672073
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:137747093 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATTCTTGTT TATATAAAGA GTTTATCAAA GCTTTTACAG
  AAATAGAGAA ATAAGTAGCT GTCTTTCCTC TGAGTCTTTT TTTTTTTTTT TTTTTTTTTT
  K
  CCTTCGCCGT TCTGGAACTC AGTGTGTACA CCAGGGTGGC CTCATTTGTG GTGCCTGCCT
  GCCTCTTGTG CTGCCTGCCG CGCCCAGCTC TGTGCCTGC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321369757	CHEV_4_137575697	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229672073					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137747093 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Eif4g3	eukaryotic translation initiation factor 4 gamma, 3			Intron
				Noncoding-Transcript-Variant
Rr602819	regulatory region 602819			1367 bp distal
Rr602820	regulatory region 602820			1883 bp proximal
Tssr39815	transcription start site region 39815			within coordinates