rs229610185 SNP Detail

Summary

• ID
  rs229610185
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:109284090 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TAAGGCATA TGGGAGGGTG GTTGAAACAG
  AATAATGATG ACACGAAATA ACCAATTAGG TTAAGGTTAT TCTGTTAAGC AGTATGGTAG
  TACGGGACTG CAGCAATATT TTTAATTCTT AGCTTTGACT ACCTGCTTGC AGGACTTTGT
  K
  GATTTTGAAA GCCAAACCCA TATTATAATC TCTTTTTTTC TTCAAATTAT TCCAGGATGA
  ATAGGCGATT TCACCATAGA AGTTATATAT TTGGAAAATT AAAAAATGAA TCATTTAACT
  ACTGTGGGCT TACTGTCATA ATTTTCACTT                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320868587	CHEV_3_109179692	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229610185					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:109284090 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr583413	regulatory region 583413			1419 bp proximal
Vav3	vav 3 oncogene			Intron
				Noncoding-Transcript-Variant