rs229588093 SNP Detail

Summary

• ID
  rs229588093
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:102277357 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATACTCCACT TTAATAAATC
  CCCGTTGTGG TTGCTGAGTG CCAGGTACTC TTCTGAGAAG CTCGTCAATA TTTACTCATT
  GAGTTCACAC TGTCAGCCTC TGGGTTTCAG AGGTCTTTCC TAGCTACAGT TGTAGTTAGA
  AGGCTGAGAA GTGTCGAGAT GTGCTAAAAT CATTTGTTTT TCTTTCCGAC TTGAAGACAG
  R
  AGGGTGAGCA TACTTAATAG AGTTTAGAAC TGTGTCACCA ACAGAGTGAA TTAATCAACA
  GTCAAACCCA AGGAGAAAGG TCAACTGCCT ACTTTCTCTT GGCAGAAGAA AGTGGGAAGA
  GGATTGTTCT TGCAAAGATT CATCACTTTT TGATGCTTTC CAGAAGTGGT GATGGATTTG
  CAATGAGCCG TCTCTCTTAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320437725	CHEV_2_102287169	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229588093					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102277357 () rs orientation: forward

Symbol	Name	Function Class
Rr561693	regulatory region 561693	812 bp proximal