rs229513372 SNP Detail

Summary

• ID
  rs229513372
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127740645 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATCGTGTGG CGTTGCAGAA
  AAAGCCTTAT GCCACCTGCT CTCCATGTGC AAAGAACTCC ACCCCACCCC ATTCCCCAAT
  CTGGTTATGA CAAAGGGCCA CCATAAAGGC AGATTAGAGG CATTTCTTCT CAGTCATCTG
  GGAGTATAAG ATGTGTGTGT GTGAGTGTGT GTGTGTGTGT GCGTGCGCGC GTGTGCATGC
  S
  TGCGTGCGCA TGCGTGCGTG CATGTGTGTG TGACAGCTTC CAAGTTCCTT TTCCCACAGT
  CCCTTAAGCT TACATAAATG CTCTCAAAAA TCATCCCCAA GCAAACAGTG ATAGAATAAA
  CAGTGTTTCA GGGCTTCTCT CCTTCACTGA AGGGCTAGCG AAAGAATTCT GGGAAGTCTT
  CCTCTCTAGA GGGTTCAGTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320958531	CHEV_3_127649914	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229513372					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127740645 () rs orientation: forward

Symbol	Name	Function Class
9830132P13Rik	RIKEN cDNA 9830132P13 gene	within coordinates
Rr584909	regulatory region 584909	1438 bp proximal
Rr584910	regulatory region 584910	1877 bp proximal