rs229487017 SNP Detail

Summary

• ID
  rs229487017
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121663882 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AATGGATTTT GAGGATTTTC TAAGGTTTTT AAGAACCTCC
  ATGTGATATG TTCAGCTATA TGAAAACTTC CTGAACCCAG TCCTTTTGGA CTTTGAGGAA
  R
  CCTCTGTTTC ACAGGCAGGA ATGTTAATAG GCTAATGGAA ATCCAGCTCT GGAGACTCGA
  CTGCTGGGGC ATTCTTTCTG ATTGTATGTG CGTGTGTAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320906546	CHEV_3_121573151	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229487017					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121663882 () rs orientation: forward

Symbol	Name	Function Class
Gm65477	predicted gene, 65477	810 bp downstream
Rr584188	regulatory region 584188	209 bp distal
Rr584189	regulatory region 584189	555 bp proximal
Rr584190	regulatory region 584190	1595 bp proximal