rs229472311 SNP Detail

Summary

• ID
  rs229472311
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:79103684 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    atttgtgta tatatataca tatatatata
  tgcacatata tatatataca tGCACATTGT TTTACGATCT TTCCTTTCTT CTGCGGCCAT
  GCCATCCTGA GGAAGACCAG GAAACATTCC GGAGCCACGT GAGCCACAGC GGTCAGGGTC
  M
  CATATGTAAG CACCACGAGC ACCCAGATGA TGCTGGAGGC ACGAATCACC ACAGGATCAA
  CTTTGACAAA TATCATCATC CAGGGTACTT TGGGAAAGTT GGTGTGAGGC ATGACCACTT
  CAAGAAGTTT CATAGCTTCT GCCCAATCGC                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323759309	CHEV_11_79026360	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229472311					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:79103684 () rs orientation: forward

Symbol	Name	Function Class
Gm11200	predicted gene 11200	within coordinates
Gm74268	predicted gene, 74268	1735 bp downstream
Rr402771	regulatory region 402771	1209 bp upstream
Rr452198	regulatory region 452198	870 bp proximal
Rr452199	regulatory region 452199	1264 bp proximal