rs229461932 SNP Detail

Summary

• ID
  rs229461932
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150205280 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGGT GGGGCGGGGG CGGGGGTGGG
  K
  GTCGACTGCT CAGCTTCTTG CTCAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321428291	CHEV_4_149494932	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229461932					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150205280 () rs orientation: forward

Symbol	Name	Function Class
Gm13093	predicted gene 13093	1560 bp upstream
Rr605186	regulatory region 605186	1571 bp distal
Rr605187	regulatory region 605187	1530 bp distal
Rr605188	regulatory region 605188	1331 bp distal
Rr605189	regulatory region 605189	within coordinates
Rr605190	regulatory region 605190	1270 bp proximal
Slc2a5	solute carrier family 2 (facilitated glucose transporter), member 5	Intron
Tssr40372	transcription start site region 40372	1492 bp downstream
Tssr40373	transcription start site region 40373	1474 bp downstream
Tssr40374	transcription start site region 40374	118 bp downstream