rs229442363 SNP Detail

Summary

• ID
  rs229442363
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52748231 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTTGTCATG AACTCCAAAC GTTTTAAAAA
  TGGAAATTAA AAAAAAAAAA AGTAATTACC TCTTAGCGTG TTAAAAAGTT AAGTTGAATT
  GCCCATTACC ATGGAGATGG CTTCCTGTTT ACCACACTGG TCGCCCAGCT GTTGAAGACC
  R
  GCCACCCAGC CAATGAAAAG ACAGCTTTTA GCTTCCCTTA TTCCATTAGT GCTTCAAATA
  GTGAGTCAAT ACAACCTGTA ATTTACTAGT CGGTAAAATT TGATAAATTG TGTTTTCATA
  TATATTAGTG GTTTTACGTT TAACAAAGTC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765410	CHEV_3_52644732	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229442363					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52748231 () rs orientation: forward

Symbol	Name	Function Class
Gm65956	predicted gene, 65956	418 bp upstream
Gm65967	predicted gene, 65967	227 bp downstream
Rr576589	regulatory region 576589	429 bp distal
Rr576590	regulatory region 576590	within coordinates