rs229440366 SNP Detail

Summary

• ID
  rs229440366
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:8927574 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTACAAAG AATGTTCCAG
  GACAGCCAGG GCTACACTGA GAAACTCTGT CACAAAACAA AACAAAACAA AACAACAAAA
  AAGAAAAGAA AAACCTTAGC TTTTCCAAAG AAAAAGATAA TGAACCTTTT TCCTAAAAAT
  GTATAATGTT TTATTTGATA TTTTTATTTA ATATAGTTTT TAATGATTAG ATTTTTCTTT
  R
  GGAAATTAAA TGGGACGACT TTAAACAGGA AGGGAACGAA GGTTCCTAAA GCAACCAATC
  TCTCTGTCTG AGATGATTTT ACGTAGAAAC CTTTCAGCAC ACAGAAACGT ACGCGTTTAC
  AGTCTGGGTG TTTAGTCTGG ACAACCAACA CTGATGCTCC TTGTACAACC CTGAGTTATC
  AGCCAGCCAA GACAAATTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320648888	CHEV_3_8862514	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229440366					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:8927574 () rs orientation: forward

Symbol	Name	Function Class
Mrps28	mitochondrial ribosomal protein S28	Intron
Rr573330	regulatory region 573330	427 bp proximal
Rr573331	regulatory region 573331	1814 bp proximal
Tssr32560	transcription start site region 32560	756 bp downstream