rs229380955 SNP Detail

Summary

• ID
  rs229380955
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:153650087 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGATG GCTCCTCGAT CTGCTGCCTC
  A
  GACCACCTCC GTGCAGCAAG CAAAA                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321031907	CHEV_3_153607414	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229380955					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153650087 () rs orientation: forward

Symbol	Name	Function Class
Acadm	acyl-Coenzyme A dehydrogenase, medium chain	mRNA-UTR
Cpgi13964	CpG island 13964	within coordinates
Rr587801	regulatory region 587801	within coordinates
Rr587802	regulatory region 587802	172 bp proximal
Tssr32439	transcription start site region 32439	401 bp upstream
Tssr36252	transcription start site region 36252	within coordinates
Tssr36253	transcription start site region 36253	11 bp downstream
Tssr36254	transcription start site region 36254	182 bp downstream