rs229298487 SNP Detail

Summary

• ID
  rs229298487
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124036636 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCAGCAAT TAAAAACAAT
  GAATTCATGA AATTCTTAGG CAAATGGATC GGGAGGATAT CATCCTGAGT GAGGTAACCC
  AAACACAAAA GATCACACAT GATATGCACT CACTGATAAG TGGATATTAG CCCAGAAGCT
  CAGAATACCC AAGATACAAT TTGCAAAACA CATGAAACTC AAGAAGAAGA AAGACCAACA
  Y
  GTGGATGCTT CGATCCTTCT TAGGAGGAAC AAAATACCCA TGGAAGGCAT TACAGAGACA
  AAGTTCAGAG CAGAGACTGA AGGAATGACC ATCAAGAGAC TGCCCCACTT GGGGATCCAT
  CCCATAAACA GCCACCAAAC CCATACACTA TTGCAGATGA CAGCAAGAAC TTGCTGACAG
  GACCCTTATA TAGCTGTCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320926586	CHEV_3_123945905	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229298487					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124036636 () rs orientation: forward

Symbol	Name	Function Class
Rr584580	regulatory region 584580	1110 bp distal