rs229253210 SNP Detail

Summary

• ID
  rs229253210
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:136857079 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCACTGTTC ACCAAAGTGC CCCAAGTCGA
  GACAGGTATA AATTTAACAT TACCATATCA GAAAACAAAA TTTGAGGCAG AATTCGGAAA
  CTTGTGTGAA AATGATTGTC AATGTACTGA TCCTAGGATA TCATGAGCAT TTGTTAATAT
  M
  TTCCCAATCA ACATTGCTTC TTTGGAGCCT ATGATTATCC GACCATAAAG AGGTTGAATA
  GTTTTCCTAC GTTAGAAACA TCCCTTaggt tgtagaatgg agagcagata tggagagagt
  aggagatgaa tgggattggg gtagataatg                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320975036	CHEV_3_136814282	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229253210					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:136857079 () rs orientation: forward

Symbol	Name	Function Class
Rr375787	regulatory region 375787	1405 bp upstream
Rr585922	regulatory region 585922	327 bp distal
Rr585923	regulatory region 585923	1993 bp proximal