rs229228276 SNP Detail

Summary

• ID
  rs229228276
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138109762 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTACCCATA ATTATTATAT
  TTCACATTTA TGATAGTTTC TCTAGCTATT TCTATTCTCT CTCTCTCTCT CTTTATTATT
  GAGATGTGTT CTCATGTAAG ACCGGATGGA CTCGAGCTTC TTATCTAGTT GAAGTTGGCC
  TGGAAAAATT TTAAAAAGAT TTTATTTATT AACTTATTTT TATTTTGAGT TAGTACCTCA
  M
  TATGCCTACC TAAGCTGCCT GGAACTCACT ATGTAATCAA GGCTGGCTTC AAACTTACAG
  AGATCTGCCT GTCTCTGCCT CCTGAAGGCT AGAATGAAAG GTATGGACCA CCGTGCGTGA
  CTTGGTTTTT TTTAATCTTA CGCATATGAA GAATGTTTTG CCTGCATGTC TGTGCATCAT
  TTGTGTGTAG TGCCCTTGGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321372974	CHEV_4_137938366	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229228276					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138109762 () rs orientation: forward

Symbol	Name	Function Class
Rr602902	regulatory region 602902	1962 bp distal
Rr602903	regulatory region 602903	199 bp proximal
Rr602904	regulatory region 602904	1269 bp proximal