rs229075890 SNP Detail

Summary

• ID
  rs229075890
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:134601895 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGTGTATTG ATCAATCATT TCCTGCCCTG
  TGATCACTTT TCCCCACCAt gtgtgactat ttttcctgca tatgtgtctg tgtacctcaa
  gcatgcttag tgcctgtaga ggtcagaaaa gggcatgtca cccctgggaa atggagttat
  R
  aatggttgtg agccaccatg gaggttctgg gttcagagta cttgggtaat ctgcaagaac
  agcgagtgct cttaaccact gagccatctt tccagtcGGC TGATGATCAC TCTTATTGCT
  GGCTCATCTT GTGATCTGAC TTCCTGTGTG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319983866	CHEV_1_136570734	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229075890					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:134601895 () rs orientation: forward

Symbol	Name	Function Class
Rr418973	regulatory region 418973	247 bp proximal
Rr418974	regulatory region 418974	328 bp proximal
Syt2	synaptotagmin II	Intron