rs229040449 SNP Detail

Summary

• ID
  rs229040449
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34502573 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGACCAAA AGACCAACCA
  GTCTCTGCCT TCCCTGGGCT CAGATTACAA ACACATGCCA CAATACTTGG GGAGTTTGTG
  TTTTGTTTTG TTTTGTTTTG TTTTGTTGTT TTGTTTTGTC TTGTTTTGAT AACATGGATT
  TAGATCAAAC TCAAGTCCTC ATGCCTACAT TCGCCAAGTA GACATCTTTC CAAATCCCTG
  R
  TCTTGACTTT GGTTGTTTAG TTTTCCAGTG TTTGGACCTT AAGTAGCATA GTCCTCATCA
  AACCACTGCA ACTTACTTGC AGACAAATTC TATCCTCCTT TAGTCTGTTT TCCTGCTATG
  ACTACAATAA ACTCCCACAA TTTAGTATCA TAAAAAACAA AACAAAACTA AGCCACAGTG
  GTGTATGTCT GTGGTCCTAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320701786	CHEV_3_34347346	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229040449					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34502573 () rs orientation: forward

Symbol	Name	Function Class
Gm64637	predicted gene, 64637	within coordinates
Gm64638	predicted gene, 64638	1814 bp upstream
Rr575135	regulatory region 575135	1618 bp distal