rs229016294 SNP Detail

Summary

• ID
  rs229016294
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141407204 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTGGAGTAG CATGCTAATA
  GGTATGAACA GACCTCAGTT AAAACTCACC CCACATCTCC CCTAGACTGG AGGCTTCTAA
  AGACCAGGCT CCTGTCGGGT TTAGCTGCTG CTGAACTTGT GGGCTTCAGG GATACTCCAT
  GTTTGATGAA TTAACCGATG AATTCTTGCT CATACTGCAT AGCTTTGATG GGAAGAGCTA
  G
  CTTCCTATTA AGAACATAAG ATTTGATCTC TCCCTTATCA CAGCACAAAA CGTGCAACAG
  AAAACCTAAG AAACATCTAG AAACCATTTT TGGTATACAG GATGCAGAAA CTCCTATCTG
  GGGAAACCTA ATGTTTGAAG AAGGTAAGAG TGAATCAGAG TGGTGAGGAG CCAAGGACCA
  CACCAGGCGG CAGTCCTCTC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321388952	CHEV_4_141235808	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229016294					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141407204 () rs orientation: forward

Symbol	Name	Function Class
Rr377311	regulatory region 377311	within coordinates
Rr603857	regulatory region 603857	548 bp distal
Rr603858	regulatory region 603858	1900 bp proximal
Tssr44357	transcription start site region 44357	342 bp upstream