rs228904422 SNP Detail

Summary

• ID
  rs228904422
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:106898683 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGAAGGGA TGAGCTCAAT
  CTCTGCATTT CCCAAGCTTT AGTAAATGAG TAACCCACTC TACTAACCTG ACAGTCCAAG
  GAAACTAAAG TATTGTGGCA AGAGATTTCC AGCGTCCATT TCACTGAGTT GTTAACTGTT
  GGGATTAATC TTACAATTTG CTATTTTTAT ATTTCATAAA TGCTGTGATT TACCTTGGTC
  G
  AATCCATAAC AAGGGAGGAA GAATAACGTC ATAATTTTCA TCGTAAGCTG TCATATCTCT
  AATCCTCACA AAGTAAAAGT GAAAAAATCC TTTATGATAA CAGTTTCTGG CTGTTCCAGC
  TGAGTGGGAT CACTATTTTT GATTAATACT GTTTGCTCAT TCACATTTGA CCTGAAATAA
  CTCTCCATTA AAACTTTCAA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321887640	CHEV_6_106871716	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228904422					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:106898683 () rs orientation: forward

Symbol	Name	Function Class
Rr635980	regulatory region 635980	533 bp distal