rs228801921 SNP Detail

Summary

• ID
  rs228801921
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:104454620 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCACAGAGT CTACCCTATT
  TCACTGAGCC GTTCGGCGCT GCACGATACC TCTATAAGGG TTATGAGTCC AGAACACAGA
  AATGAATAGT CACCTGGAGC GTGCTGGCAT TGGCCTGCTT TAGACTTGGG AATACTGTAA
  CTAGGGGGAA AAAATAAGAA GCATTCACAA CTGCACAGAC CACACTAGGG AAAAAAGAGG
  W
  CTCAGCTTAG TGTAAGTTGG TGTGGCCACT CATCATATAT TCTGAGGCAA TGTAGGAGCT
  ACAGAAACAA TAATCTTGAG TGTGAAATAT CTTTTATTTG GCCATTAACA GGCTTTAGCA
  ACCAACCTGG GGTGGGAGGC CATGCCTGTC TCCAGTAGAC TCTGTGGCCA ATTCCCTTGT
  GTTATAGAAG TGCTAATCAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321241244	CHEV_4_104270028	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228801921					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:104454620 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dab1	disabled 1			Intron
				Noncoding-Transcript-Variant
Rr596483	regulatory region 596483			93 bp proximal
Rr596484	regulatory region 596484			640 bp proximal