rs228774551 SNP Detail

Summary

• ID
  rs228774551
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:125642474 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCAGAATAG CTTTCTGAAA
  ATAAATTTGA GATTAAACAA TGTTTGAAAA CCACTCCTGA TTTCTGTTAG CATATGCACC
  TTTGAAGACA GGCTCTGGCA GTCTCCAGCA TAGTCTTTTC TTGACTAAAA GGTGTTCATA
  GTACTAAATG AATAAATTTG CTAAAAATAT AGATAATTTT GGTTTTTTGC AGGATGCTAA
  Y
  GTTCAAAGAT TTTATCTTAT TTTATTTTCT GGTCAAGTAG TTTTATGTTA AACATACCTT
  AAATGGGGAA TAAAACCAAG ATAGTTTCCT GCCATTAATT GTATGGAAAT GGTTTGTTGG
  TAATTTCAAA TAAGAAAATG TGGGTACTGG CACATTTGTG TAAGTTGGGA AATATTATTC
  AGGGGGATTC AACAAAATCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320940423	CHEV_3_125551743	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228774551					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125642474 () rs orientation: forward

Symbol	Name	Function Class
Rr584614	regulatory region 584614	415 bp proximal
Rr584615	regulatory region 584615	515 bp proximal