rs228726605 SNP Detail

Summary

• ID
  rs228726605
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:58490831 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttctagcca tgacagcctg tgacctctgg
  cctgtgagcc agaataaacc ttcctccctt aaattgtttc tattaggaat tctaccatga
  tgacaagaaa agtaactaat ataCGTGGgg gggggggggt gctcacttgc aagtgcacta
  R
  agaggcagag ggaggcggat ctctgagctc aaggctagcc tggtctacat gagttccagg
  acagccacaa ctacacagtg aaacaaacac actatctcaa aaaaaaaaaa aaaaaaagaa
  aagaaaacag aaatcagaaa aaaagaaaaa                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321138270	CHEV_4_58503703	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228726605					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:58490831 () rs orientation: forward

Symbol	Name	Function Class
Lpar1	lysophosphatidic acid receptor 1	Intron
Rr592898	regulatory region 592898	132 bp distal