rs228713868 SNP Detail

Summary

• ID
  rs228713868
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:15030550 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGGTATAGG GTATAGTCGT TGAATTTTAC
  AAGCCAAGCC AGAGCTGGCA ACATTTTGCT TCTATAACTG AAAACAAAGA TAGCATATTG
  AGTGCTCATT TGATCTGATG GTAGGAAACA AACACTGGCT TAGGACTGTC TGTTTTGTTC
  Y
  CCTGGGACAT CTTTTAAAAT CCCAACTCCT AAAGGATTGC CAGGCTTGGG TCTTCATGCC
  TTCTGGGTGT CTGATCCCTC TTGTGTCCAT GGAGGTAAGA TACCACCTTC CGGACATGGA
  CACTGATACA TAGATACTGG TTTTCTGGTG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320668324	CHEV_3_14965490	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228713868					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:15030550 () rs orientation: forward

Symbol	Name	Function Class
Rr573739	regulatory region 573739	within coordinates
Rr573740	regulatory region 573740	1777 bp proximal