rs228705287 SNP Detail

Summary

• ID
  rs228705287
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:43891154 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    atggtagct cacaaccatc tgtaatggga
  tctgatgccc tcttctggtg tctgaagaga gcaatagtgt gtgtgtgtgt gtgtgtgtgt
  gtgtgtgtgt gtgtgtgtgt gtgtgtatct atacctttat ctatatctat ataatctttt
  W
  aaaaaaGCCT GAAGCCCACA GAGGCCAGCA GCAGGACCTA GGACCTGACC TTGCTCCCTA
  AGCCCACAGC CCATGCCTCT CTGCTACGCT TATCTCCACT TGAGGTACCA GGATCCTAAG
  TGGGGACTCC ATGAGCCTCC AGACTTTCCC                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322939863	CHEV_9_43787940	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228705287					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:43891154 () rs orientation: forward

Symbol	Name	Function Class
Gm10688	predicted gene 10688	380 bp upstream
Rr677493	regulatory region 677493	1534 bp proximal