rs228620928 SNP Detail

Summary

• ID
  rs228620928
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16364061 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gattcataa aatcccatgc accctattag
  atcaccatgg agtaaggctg gtcttaaatt ccaacaaaaa caatggaaaa cacacaccca
  tggaagctta acaattctct cctcaatgat aacttgggca aggaagagaa aaagagatat
  Y
  aaaggctttt tagaatttaa caaaaatgag cccacaatat acccaaactt atgggacaca
  atgaaagcag tggtaagagg aaaactcata gctctaagtg cctccaaaaa gaaactttag
  agagcttaca ctagtagctt gacagcacac                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320671132	CHEV_3_16209897	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228620928					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16364061 () rs orientation: forward

Symbol	Name	Function Class
Rr573795	regulatory region 573795	1060 bp proximal
Rr573796	regulatory region 573796	1136 bp proximal