rs228605822 SNP Detail

Summary

• ID
  rs228605822
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:114223421 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGAGCTTCT GGGTAGTGGG GATAGCTCAA
  CAAATAAATC ATCAGGGCCT AGAGTGAAAA GTGCCCCTGA GAGGCTGAAG AAGCCCTGGC
  aaagaaggag gaagaagagg aagaggagga agaagaggag gagaaaagga aggaaggaag
  S
  aaggaaggaa ggaaggaagg aaggaaggaa gcaaggaagc aaggaagcaa ggaaggaagg
  aaggaagcaa ggaaggaagg gagggaggga gaaagaaaag gaaaggaaag gaaaggaaag
  gaaaggaaag gaaaggaaag gaaaggaaag                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321273750	CHEV_4_114038829	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228605822					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:114223421 () rs orientation: forward

Symbol	Name	Function Class
Rr597553	regulatory region 597553	169 bp distal
Rr597554	regulatory region 597554	1616 bp proximal