rs228450204 SNP Detail

Summary

• ID
  rs228450204
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138281520 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGGT AGGAAAGTGA AAGCTGTCCA
  T
  TCACTGAACC CAGAAGTCCC GGGAG                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321374823	CHEV_4_138110124	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228450204					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138281520 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15154	CpG island 15154	568 bp proximal
Cpgi15155	CpG island 15155	1263 bp proximal
Rr602963	regulatory region 602963	304 bp distal
Rr602964	regulatory region 602964	208 bp proximal
Rr602965	regulatory region 602965	849 bp proximal
Rr602966	regulatory region 602966	1363 bp proximal