rs228158229 SNP Detail

Summary

• ID
  rs228158229
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17630351 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGATGTGCAC AAAACATTCA CCAGCTTGGA ACCATCAACA
  ACTCTATCAT GGAATTGGGA GAGGCTCTTA AGGTTCCACC CACCCTGTGG AGTTACTGGC
  K
  ATTAATGGTT ACTGGGACAA TGAGAGTCCA CCCTGCTTCT GTCCTCCCAA TTGTAGATCA
  GTTGTTAAGT TGTTCATATT CTAGGTATGG GTGGGAGAG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321755910	CHEV_6_17580352	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228158229					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17630351 () rs orientation: forward

Symbol	Name	Function Class
Rr626820	regulatory region 626820	953 bp distal
Rr626821	regulatory region 626821	163 bp distal
Rr626822	regulatory region 626822	1357 bp proximal