rs228144110 SNP Detail

Summary

• ID
  rs228144110
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16364235 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGCAAGGA AGAGAAAAAG
  AGATATCAAA GGCTTTTTAG AATTTAACAA AAATGAGCCC ACAATATACC CAAACTTATG
  GGACACAATG AAAGCAGTGG TAAGAGGAAA ACTCATAGCT CTAAGTGCCT CCAAAAAGAA
  ACTTTAGAGA GCTTACACTA GTAGCTTGAC AGCACACCTG AAAGTTCTAG AACAAAAAAG
  M
  AGCAAATACA CCCAAGAGGA GTAGACATCA GGAAATAAGT AAACTCAGGG CTAAAATCAA
  CCAAGTAAAA ACAAAAAGAA CTATACAAAG AATCAACAAA ACGAGGAGCT TTTTTTTTTT
  TTTTTTTTTT TGAGGAAATC AACAAGATAA ACCCTTAGCC AGAGTAACCA GAGGGCACAG
  AGACAGTATT CAAAGTAATA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320671135	CHEV_3_16210071	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228144110					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16364235 () rs orientation: forward

Symbol	Name	Function Class
Rr573795	regulatory region 573795	886 bp proximal
Rr573796	regulatory region 573796	962 bp proximal