rs228092335 SNP Detail

Summary

• ID
  rs228092335
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151988426 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGGATTCC AACCCTCATC
  TTTACCTTTA AGCTAAGAGA ATATATTCAA TTTTTAAAAT AGTTTAACTG CTTTTTTCTG
  TTTTGTTTTG TTTGTTTGTT TGTTGTTTTT GTTTTGTTTT GTTTTTTGAG ACAGGAACTC
  ATATGCACCA GGCAGGCCTC AAACTCACTG TATAGCCATG GATAGTCCAA CCTTCTTTTT
  A
  ATTTTTATTT CATGTGTATG GGTATTTTGT CTGCATATAT ATCCGATCAC CACATGCCTG
  CCTGGTGCCC TCGAAGTCCA GAAAAGTGTG CCAGACACCC TGGGTGGAGT TGTAGACAGC
  TGTGAACTTC CACATGGGTC CTGAAATTTA AACTCTGATC CACCGGAAGA GCCAGTGCAT
  TTAAAACCAT CTCTCCTGCC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321433744	CHEV_4_151278078	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228092335					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151988426 () rs orientation: forward

Symbol	Name	Function Class
Rr605665	regulatory region 605665	367 bp distal
Rr605666	regulatory region 605666	79 bp proximal