rs228032672 SNP Detail

Summary

• ID
  rs228032672
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101717344 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGAGGATA TCATCTTGAG
  TGAGGTAACC CAATCACAAA ACAACACACA TGCCAGGCAT GGTGGCGCAC GCCTTTAATC
  CCAGCACTTG GGAGGCAGAG GCAGGCGGAT TTCTGAGTTC GAGGCCAGCC TGGTCTACAG
  AGCGCGTTCC AGGACAGCCA TGACTACACA GAGAAACCCT GTCTCGAAAA ACAACAACAA
  M
  AAAAAACAAA AAAACAAAAA ATACAAAAAC CAACACACAT GATATGCACT CACTGATAAG
  TGCATATTAG CCCCGAAGCT CACAATCCTT TTTAGACGGG GTAACAAGAT ACCTATGGAA
  GGAGTTACAG AGACAAAGTT CAGAGCAGAG ACTGAAGGAA CGACCATCCA GAGACTGCCC
  CACTTGGGGA TCCTTCCCAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321231583	CHEV_4_101532752	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228032672					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101717344 () rs orientation: forward

Symbol	Name	Function Class
Rr596209	regulatory region 596209	765 bp proximal
Rr596210	regulatory region 596210	851 bp proximal
Rr596211	regulatory region 596211	935 bp proximal