rs227926082 SNP Detail

Summary

• ID
  rs227926082
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101469453 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACAGTCTCC TGCCTCTGTA
  CCCCTATCCC ACTGTAAAGC TGCTAGGACT ACAGGTGTGC ACCACCTTAT CTGGCTTTGT
  CCCAGATTAT CAAGCTTATC CAGCAAGTGC CTTTACCTAC TGAGTCATCT CTAGCCCTCC
  CCAACCCTTC ATTCATTATA TGTATGAAAC AGATGCCGTT GTGTGCACAG AACTATGTTT
  R
  AGTTGTGTGC ACAGAACTAT GTTTGACTGG CTTTGGTAAG CGAATTCAAG GACAAGTCGC
  ACACTACCCA AACCCTCCAA GCCAAAGCTG GGAGCACAAG AAGGCCTGGC CCTGCAGAGA
  TATAGTACCC ACGCCTGTGT CCTGCCCCAC AAGCGGCCCA GCCTAAAGAA CACACTGATT
  CTTGTCTATG TTTTCCCCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320852563	CHEV_3_101366060	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227926082					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101469453 () rs orientation: forward

Symbol	Name	Function Class
Rr582081	regulatory region 582081	520 bp distal
Rr582082	regulatory region 582082	446 bp proximal