rs227903181 SNP Detail

Summary

• ID
  rs227903181
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132245154 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGTACAGAG ATGAGGGGAG
  CTGGAGAGAC AGCTCAGCAG TTAAGAGCAC CAGCTGCTCT TCCAGAGGAC GTAGGTTCTA
  GCACCCAGTG TCTCACAATC ACTTGCAATT GCAGTTCCAG AGAGTTCAAT GTCTTCTTCC
  AGCCGCCATG GGTACCAGGC ATGCAAGTCA TGCATAGGCC TACATACATG CAAGACACAC
  M
  CACACATCGG AAAACTAATT TAAGTAAAAC CAAGAAGTGC ACTTTGAGGC CAGACATTTG
  GGGGTAGGGA GTAAGATGAG GGCTGGGGCG TGAGAGAGCT TGTATGCATG TGTGTTCTCA
  TGTGTGTCAA GGCACACCTG TGGAAGCCCG AAGGCACTGT GGTGGGAGTC AGTTTTCTCC
  TTCTACCATT TGATACTGGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321333996	CHEV_4_132073758	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227903181					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132245154 () rs orientation: forward

Symbol	Name	Function Class
Gm68741	predicted gene, 68741	within coordinates
n-TAagc8	nuclear encoded tRNA alanine 8 (anticodon AGC)	1764 bp downstream
Rr377207	regulatory region 377207	1528 bp downstream
Rr600998	regulatory region 600998	1815 bp distal
Rr600999	regulatory region 600999	within coordinates