rs227836851 SNP Detail

Summary

• ID
  rs227836851
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141448053 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGAACCAT ACAGCTGACT
  GTGCGCACAC ATGCCTAATA CATAAAACAG GCATTTATGT ATAAGGTGCT GTGAGCAGGG
  TGGAAAACAC TTCACTTACG GGGCTATAGT AGATATAACA TGAGAATAAT AAATTAGAAC
  AGAAACCATC TCCACCTGCA CATGTGATTA AAGTGGGACT CTGAAGCCAA GCCAAGAGAC
  G
  GGAATGGAAG AAACTCAAGT AAACAGACTG AATGAAAGCT GAGAGGAAGG GACAAAACAG
  AAAAACTGGT TAGGGAGCTC AAGACAAACA GACTAGGACT TAAAAAACAA AAGACTATCA
  TGTTTACTTT CATGATCCAA TGAAAGGAAG TGACTCAAGT GTCTGGGGTG GATCCTGTTC
  CTGCCTGAGG GGGGCTAGCC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321389267	CHEV_4_141276657	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227836851					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141448053 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15241	CpG island 15241	1990 bp proximal
Ddi2	DNA-damage inducible protein 2	Intron
Rr398662	regulatory region 398662	1155 bp downstream
Rr603862	regulatory region 603862	627 bp distal
Rr603863	regulatory region 603863	within coordinates
Rr603864	regulatory region 603864	1179 bp proximal