rs227781056 SNP Detail

Summary

• ID
  rs227781056
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151557483 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATGTTTTC AAAGCTGAAA
  TCACACCAAG TACCTTTTCC AACCACAATG GAATAAAACT AGAAATCAAT AGGGAAAACT
  GCCAAAATTA CACAAACACA GGAAAATTAA ACAACTTCTG AAACACCAAT TGATGAGAGA
  AGAAATTAGG AAACTTTTAA TTATCAAACC AAATAAAAGT TATCAGTACG TTTGCCAGGA
  C
  GTATCGGGCA CAGCAAAGAC ATCAGGAAGA GGATGTGGCT GAGGTTGAAG AGAACACCAA
  GAAGATGAAA AGACATCTCT GTCCATGGAT TAAGAGAATC ATGGTAGCAC TTCCAAACTC
  GCAAAGCGAC CTACATTGCC ATCACCACAG TGTGGTCTCT ATCAGAACAT CAGTGACAGC
  CTTCACAGAA GCAGCAAACC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321027290	CHEV_3_151514810	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227781056					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151557483 () rs orientation: forward

Symbol	Name	Function Class
Gm31596	predicted gene, 31596	within coordinates
Rr587424	regulatory region 587424	197 bp distal