rs227714787 SNP Detail

Summary

• ID
  rs227714787
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:103233701 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTTGTGGCG TTTTCCTTGT TGTGGTTAGC
  CTTGCCCCAG GAGGCCTGTA TACACCACTG GGCATTGCTG GCTCCGGGGT TTCTGTAACT
  AATAGATAAA CCATTCAAAT GTTTGACTTT CTTGTAACAT TTTCCCACAC TCCTGATCCT
  R
  TAACAACTGT AGGAAAGGCC ACCCTGATTT AGAATGGATT TGGACTACAC AATAAAAACA
  AAGTTCTGTG AGAAAATGTC TCAAGTAGAA CCTTGCCCAT CTCTTAATCT CTTCTGAAAT
  TCAACACTGC TGTCGCTGGT GTTTCTATCA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323160962	CHEV_9_103258832	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227714787					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:103233701 () rs orientation: forward

Symbol	Name	Function Class
Cdv3	carnitine deficiency-associated gene expressed in ventricle 3	Intron
D9Mgc22	DNA segment, Chr 9, MRC UK Mouse Genome Centre 22	803 bp proximal
Rr685916	regulatory region 685916	1444 bp proximal