rs227692336 SNP Detail

Summary

• ID
  rs227692336
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:38831403 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTTGCCTT CAAAGGGCAG
  ACAGGATCAA AATGGAGCAG AGTGGCTGCT TTTGTGGTGG CAGTAATGAG CTGGGGTGGG
  ACCAGATAGA CAGACTGTGG ATTCAGGGTC ACGGAGGTGC CAGGCTTCAT GAATTTATTC
  ATTGAGTGTG TGAGGATCTC TGCTGGTGAC TGCATGCGCG GTCCCACTAT CACAAGGTGA
  K
  TCCTGTGATG CACAGCATTG CTCTGTCACT ACAAAGAGCA ATCCAAACAG CATTACATAT
  CTGCCCCCAA ATGCATAAAT TTTAAATCCT AAAGATCATA TCATATGGTC ACAGGCTCAC
  TCACTGTGAT CTATATTTTG TTTGTTCTTT TTTTCCCAGT ACATTGTAGG AATAAAAACC
  TAAGTTACCA AGAAACATAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320722891	CHEV_3_38676176	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227692336					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38831403 () rs orientation: forward

Symbol	Name	Function Class
Rr575702	regulatory region 575702	within coordinates